I am speaking from my experience using Antigravity LFP batteries in collectable cars. I believe this experience is transferable to a boat as long as the set up is a Start bank and not a house bank.
I don't see an over charging issue. Internally regulated alternators do not put out the high voltage that would upset AGM, FLA, or LFP batteries. While regulators can be designed for higher voltages and faster recharging the standard alternator does not. Its really hard to charge a battery to 100% with just a standard alternator. I don't believe a standard alternator putting out the normal 13.8v is ever going to cause a BMS to shut down for overcharging.
In the world of cars we concern our selves more with CCA than with Ah. In other words the battery capacity is more in the area of 50-100 amp hours unlike House banks that can easily be in the thousands of Ah. This means the alternator will run at 100% for a much shorter time. On my boat I was concerned that a low house bank would work my alternator to death. In a start battery with a single 100ah or dual 50ah arrangement I'm not very worried about killing an alternator even with a low battery. In a start application a low battery would not be the norm.
Change is a difficult thing, even I have questions about LFP as a start option. For now it just works best for me to have LFP for house and AGM for start and thrusters. My crane still uses an FLA battery but I will definitely replace it with LFP when it fails.
The Antigravity LFP is a very expensive start battery. In most cases it just is not needed in my car collection. I can easy keep all my cars on little 2 amp battery maintainers. However, there is one car that lives in a barn with no power. That car has an analog clock. My option is to either disconnect the battery every time our switch to an LFP that can handle the clock load for 6 months and still have enough power to start the car.