There is no harm in running in ALL, however, if one alternator fails, you won't know it because the other is carrying both engines. You'll know it when the second one fails.
When paralleled, one alternator often does shut down, as it senses the higher charge voltage from the other, but if they are paralleled you'd only know one was shut down by measuring current output at the alternator. The same thing happens when you run a battery charger on a start circuit when underway, alternator output often goes to zero. If that charger is always on underway, via a genset, it can mask a failed alternator.